CDS

Accession Number TCMCG007C50312
gbkey CDS
Protein Id XP_009110397.1
Location join(20151679..20151817,20151907..20152039,20152211..20152332,20152487..20152634,20152739..20152883,20152968..20153091,20153178..20153278,20153392..20153523,20153620..20153700,20153954..20154144,20154241..20154313,20154397..20154456,20154659..20154697,20154782..20154870,20154975..20155039,20155126..20155172,20155397..20155456,20155522..20155593,20155790..20155819,20155907..20156001,20156098..20156203,20156299..20156361,20156451..20156525,20156864..20156938)
Gene LOC103835946
GeneID 103835946
Organism Brassica rapa

Protein

Length 754aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA249065
db_source XM_009112149.3
Definition U3 small nucleolar RNA-associated protein 25 isoform X1 [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category K
Description U3 small nucleolar RNA-associated protein
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03009        [VIEW IN KEGG]
KEGG_ko ko:K14774        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000462        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006364        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016072        [VIEW IN EMBL-EBI]
GO:0019843        [VIEW IN EMBL-EBI]
GO:0022613        [VIEW IN EMBL-EBI]
GO:0030490        [VIEW IN EMBL-EBI]
GO:0030515        [VIEW IN EMBL-EBI]
GO:0030684        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032040        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034470        [VIEW IN EMBL-EBI]
GO:0034511        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0042254        [VIEW IN EMBL-EBI]
GO:0042274        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCTCCAAAAAATTCCAATGCAGTGTCGAAGAGACACAGACCACACGAGAAATTCGATAAGAAACGGGAGATGAAGAAGGCTAAACTTGCTGAGAAGGAAGTTGTTTCCAATCATCCAACAGATGAGGAGGATCTAGATTCATCTGAAGAAGAAGACGCTATTGAGGAAGAATCGGAAGCAGTGGTTTACAGAAAACCGACGACTTACGATAATTTGCTGGCGTCTCTCGGTTCATCTAACAAAGCTGTTGCTGATATGAACAAAAGAAGGCAGAGAGAGGAGGAAGGTAAAAGCGATACAGAAGGAGATGATGAGGACGAGGAAGAGGATGATGACAGTGGGTCTGAGGATCAAATCTCTACAGACGGAGAGGATGATGATGAGATTCAAGGGGACGATGAAGTTCTTACTGAGAACACAGAGAAGGAGAACAATGATAATCTTAGCGAGGAAGAAGATTCTGACGGTTATGAAACGGACGAGGAGGTTGAGTTGAGTACCAATGGCCAACCATTAGTAGATGCTTCTTCATCTGCTAGTGCATTTAGTGAGCACCTTAGTCACATATTATCAAGTGAAGAATTGAAAACCTTACCCGAAGGCAAGTGGAAATTTAAATGGGAAGCACCTGCCATTGACATGCCAAATTGCAGGTGGAAAGGAACAAGACCAAATTTCCTCGATGCTGTTCAGAATGATTCACCTTATGGCCTCAAGCCGAAGTTATTTAAGCACTGGCTTCAATTATACCAGAAATCTGGTGGGAAGGATTTTGACTCTTCTAAAAGAAGAAGATTTTTCTCCATCTGCAACAGCTACCTGGATATTTTGCACTCTAACAAGAGACCCTTTTACAATAAAGGCCGTGAAGAAGACTCAAGTGCCATGGACGCTTATCTTATGCATTCTCTGAATCACATTTTTAAAACGAGAGATCTTGTGAAGAAGAATGAAAGTAAAATTGCGAAGCATCGAGAGACGTCCGAAGAGGAAATTCTTTCTGATGATGGATTCCTTGACCAAGGATTTACTCGTCCAAAGGTATTGATTCTACTACCGATGAGGAGTATTGCCTTTCGCGTTGTTAAGAGACTCATACAACTAACTCCAGAATCTCAAAGGGTTAATGTGGAACACCTTGACCGGTTTAATGCCGAGTTTGGATGTGAAGACGAATCCGATGACGATGATGAGAAGACATCCAAAAATGGAAAATCGACAACCCACAAGTCTTCAAAACCTTCTGATTGGCAAGCCCTTTTTGGTGAGAAGAACAGTGATGATGAGTTTATGTTAGGCATTAAGCATACAAGGAAGAGCATTAGACTGTATGGTGACTTCTATTCCTCGGACATGATTATTGCTTCCCCTCTCAAGTTACATATGGCAATTGGTCAAGCAGAAGAAAACAAGGAAAGGGATGTTGATTATCTGTCGTCCATTGAGGTTTTGATTATTGATCATGCAGATATAATATCTATGCAGAATTGGTCGTTCCTTGCTACAGTCGTCGACCACATAAATAGATTGCCAACAAAGCAACATGGTACCAATGTCATGCGGATCCGGCCGTTGTATTTGGATGGACAGGCACGGTTCTATCGACAGTCAATAGTTCTAAGTTCCTATTTAACCCCAGAGATGAATGGTCTATTCAATCGCCAGTGCTTGAACTATAAAGGAAAGATAAAGCTGGCGTGTGAATACAAAGGTGTTCTCGAGAAAGTGTTGCTCCCTGTTCGTCAGATTTATGAAAGATTTGATGCAGACTCCATGACCCAAGCAGACAATGCCCGTCTTGAATATTTTACCAAAAAGATATTCCCAAAGATCAAAGATTCTGTTGAGGGAGGAGTAATGATCTTTATCCCTTCTTACTACGATTTCGTCAGGGTTAGAAACTATCTGAAGTCGCAGAATGCCTCTTTCTGTCTTCTTGGAGACTATACAAAGAATGCGGATATATCCCGTGCACGAGAGTGGTTTTTTGCAGGGAGTCGAAAGATCATGCTTTACACTGAGAGGGCGTACTTCTATCGGAGATACAAGATCCGTGGCATAAAGAACTTAATTTTCTACTCTCTTCCGGAGCGGAAGGAGTTTTACCCTGAGATAATGAACATGCTTGATGAAGGATCGTATGACATGATGTCCACTGCACTTTTTTCTCGTTTTGATCTGCTCAAGATGGAAAGGATCGTTGGGACTGCTTCCGCAAAAAGAATGATCAGTTCTGATAAGAGCATCTTTGCTTTCTGTTGA
Protein:  
MAPKNSNAVSKRHRPHEKFDKKREMKKAKLAEKEVVSNHPTDEEDLDSSEEEDAIEEESEAVVYRKPTTYDNLLASLGSSNKAVADMNKRRQREEEGKSDTEGDDEDEEEDDDSGSEDQISTDGEDDDEIQGDDEVLTENTEKENNDNLSEEEDSDGYETDEEVELSTNGQPLVDASSSASAFSEHLSHILSSEELKTLPEGKWKFKWEAPAIDMPNCRWKGTRPNFLDAVQNDSPYGLKPKLFKHWLQLYQKSGGKDFDSSKRRRFFSICNSYLDILHSNKRPFYNKGREEDSSAMDAYLMHSLNHIFKTRDLVKKNESKIAKHRETSEEEILSDDGFLDQGFTRPKVLILLPMRSIAFRVVKRLIQLTPESQRVNVEHLDRFNAEFGCEDESDDDDEKTSKNGKSTTHKSSKPSDWQALFGEKNSDDEFMLGIKHTRKSIRLYGDFYSSDMIIASPLKLHMAIGQAEENKERDVDYLSSIEVLIIDHADIISMQNWSFLATVVDHINRLPTKQHGTNVMRIRPLYLDGQARFYRQSIVLSSYLTPEMNGLFNRQCLNYKGKIKLACEYKGVLEKVLLPVRQIYERFDADSMTQADNARLEYFTKKIFPKIKDSVEGGVMIFIPSYYDFVRVRNYLKSQNASFCLLGDYTKNADISRAREWFFAGSRKIMLYTERAYFYRRYKIRGIKNLIFYSLPERKEFYPEIMNMLDEGSYDMMSTALFSRFDLLKMERIVGTASAKRMISSDKSIFAFC